Normal Distribution
nothing is called 95% until it has been counted
Concept

Hierarchical model — where it appears

A model in which group-level parameters are themselves drawn from a distribution whose parameters are estimated. It sits between fitting each group separately and pooling them all, and where it sits is decided by the data rather than by the analyst.

Named by 19 essays across 4 fields — each of them below, with the objects they name alongside it.

Eight groups, τ = 1 against a within-group spread of 3. Each row is a group. The hollow circle is the group's own mean, the filled one is the estimate after pooling, and the small mark is the truth the data was generated from. The group of 3 moves 75% of the way to the population mean of 0.10; the group of 40 moves 18%.

Eight groups, one population

Eight hospitals are neither one hospital nor eight unrelated problems. The two obvious answers cost 2.23 and 1.15 in squared error; the estimate between them costs 0.88, and the weight it uses is not a matter of taste.

hierarchical · Pooling Six groups of 10, each fitting its own slope, then borrowing. Each faint line is one group's own least-squares slope through its own centre; each solid line is that slope after pooling towards the population slope of 0.79. Every group has the same 10 observations. The group whose x values span 0.4 has a slope standard error of 1.86 and moves 91% of the way in; the group spanning 2.0 has a standard error of 0.37 and moves 28%.

The slope that borrows

Pooling a mean makes it look as though how much a group borrows depends on how much data it has. Pool a slope instead and the illusion breaks — ten groups with ten observations each can borrow anything from 28% to 91%, decided entirely by where those ten observations were placed.

multilevel · Levels What eight groups say about τ, when the truth is 1. The posterior density for the population spread after eight groups whose standard errors run from 0.5 to 2.1. The shaded band is the central 95% interval, from 1.02 to 4.44; the posterior median is 1.99 and the mean 2.18. The vertical mark at 1.07 is the moment estimate that empirical Bayes substitutes and then treats as known.

What the plug-in forgets

The shrinkage weight needs a population spread, and the population spread has to be estimated from eight numbers. Empirical Bayes estimates it, substitutes it, and proceeds as though it were known — and the interval that comes out covers 79% rather than the 95% it claims.

fullbayes · Shrinkage Which groups partial pooling serves, standard error 1 population width. Pooling's expected squared error for a group, divided by its own mean's, against how far the group truly sits from the centre. It is ×0.25 at the centre and crosses ×1 at 1.732 population widths, beyond which 8.33% of a normal population lies; capping the shift at one standard error holds every group under ×2.

A group from the population's own tail

Partial pooling halves the total squared error when a group's own standard error equals the spread between groups. Every group whose true effect sits more than 1.73 population widths from the centre — 8.33% of a perfectly normal population — does worse than it would have with its own mean, and its loss grows without bound. Among eight groups with the spread estimated, the most extreme is worse off in 61.6% of datasets. Capping the shift at one standard error keeps the total at 0.528 of the unpooled error and holds every group under twice it.

borrowed · Shrinkage Three priors on the spread, at a true τ of 0.5. The posterior for τ under a flat prior (mean 1.66), a half-Cauchy of scale 1 (1.32) and one of scale 0.25 (1.15). The three answers differ by 30% of the widest. The prior does visible work when eight groups cannot separate a small spread from none, and almost none when they can.

A prior on the spread

Integrating over the population spread means putting a prior on it, which sounds like the objection rather than the repair. The prior's effect is measurable, it is invisible where the groups are clearly different, and the reflex choice for a scale parameter turns out not to have a posterior at all.

fullbayes · Prior Ten groups of 10, pooled on the log-odds scale. Each row is a group. The hollow circle is its own proportion, the filled one is the estimate after pooling, and the vertical rule is the pooled population proportion of 31.3%. One group saw no events at all, and its raw proportion of zero becomes 21.2% — an estimate the group's own data cannot produce and the population's can. The arrows are not the same length, and none of the groups differs in size.

Pooling a proportion

A proportion cannot be shrunk on its own scale — an estimate would leave the interval, and how much information a count carries depends on where it sits. Move to log-odds and the approximation works, at the price of a group that saw nothing having no estimate at all until the correction supplies one.

multilevel · Levels How the truth, the raw means, the posterior means and the constrained estimates spread, standard error 1. Beyond two population widths above the centre lie 2.28% of the true values, 7.86% of the raw means, 0.234% of the posterior means, and 2.28% of the constrained estimates.

Estimates that are too alike

Posterior means give each group its least-error estimate, and as a set they are too alike: with each group's standard error equal to the population's spread, they spread 0.707 as widely as the truth. Beyond two population widths lie 2.28% of the true effects, 7.86% of the groups' own means, and 0.234% of the posterior means — a tenth of the truth. Rescaling the estimates to the right spread counts the tail exactly and costs 17% more squared error; summing each group's posterior chance of being beyond the line counts it without changing any estimate.

borrowed · Shrinkage 16 groups shrunk towards a fitted line, at γ = 1.2. Hollow circles are the groups' own values, filled ones the estimates after pooling, and the diagonal is the line fitted through them with each group weighted by how well it is measured — slope 1.21, intercept 0.20. The horizontal rule is where the same 16 groups would have been shrunk to with no covariate. The spread left to borrow against is 0.64 with the covariate against 1.28 without, so every group is pulled further in than it would otherwise have been.

Borrowing towards a line

A group shrunk towards the average of all groups is being compared with groups it has nothing in common with. Fit a group-level predictor and it is shrunk towards what the predictor says a group like it should be — which halves the spread left to borrow against and takes a quarter off the squared error.

multilevel · Levels How often "there is no spread between the groups" is reported about data that has one. Every dataset here was generated with a real population spread of 1. The moment estimator is the difference between the observed spread and what noise alone would produce, clamped at zero, and the difference comes out negative often: at eight groups it reports exactly zero on 32.6% of datasets, which is an instruction to pool completely and give all eight groups the same estimate. The rate falls to 4.2% at 48 groups.

When the spread estimates to zero

The usual estimate of a population spread is a difference of two positive quantities, clamped at zero. On a third of eight-group datasets with a real spread in them the difference comes out negative, the estimate is exactly zero, and every group is pooled completely on data that said no such thing.

fullbayes · Pooling How many of a league table's top ten are small groups, ranked four ways. A hundred groups with sizes from 4 to 400, of which 36% have twenty units or fewer. Small groups make up 36.3% of the true top ten, 62.1% of the top ten by raw means, 13.4% by posterior means and 22.9% by the posterior chance of being in the top ten. The three rankings recover 4.43, 5.38 and 5.47 of the true top ten.

A league table of a hundred

A hundred groups with sizes from 4 to 400, and a top ten to publish. Ranked by their own means, small groups fill 62.1% of the top ten against their 36.3% share of the true top ten. Ranked by posterior means they fill 13.4%. The ranking built from each group's chance of being in the top ten recovers 5.47 of the true ten, the best of three and barely half; and the group ranked first could hold any rank from 1 to 31.

borrowed · Shrinkage Counted coverage of two 95% intervals, over 2,000 datasets. Each point is one of the eight groups, at its own standard error. The integrated interval covers 95.2% overall against its stated 95%; the plug-in covers 78.8%, and its shortfall grows with the group's standard error — from 86.1% at se 0.5 to 77.0% at se 2.1. The mean widths are 3.48 and 2.66.

The interval that integrates

A credible interval for one group in a hierarchy has to average over every value the population spread might take. That averaging is what makes it cover — 95.2% against the plug-in's 78.8% — and it costs 31% more width, a heavier tail, and a mixture rather than a normal.

fullbayes · Credible What 20 clusters of 20 correlated observations do to a 95% interval. Each study has 400 observations arranged as 20 clusters of 20. The lower points are the counted coverage of the usual interval, which treats them as 400 independent observations; the curve through them is 2Φ(1.96/√deff) − 1 with deff = 1 + 19ρ, computed before any data was drawn. At ρ = 0.81 the interval covers 36% rather than 95%. The upper points treat the cluster as the unit and need no variance components at all.

Two levels at once

A third level of grouping adds no new arithmetic and produces one number — the design effect — that decides how many independent observations a clustered study is worth. It is the same quantity the time-series field computes for autocorrelated data, arrived at from a completely different picture.

multilevel · Levels One group 6 population widths from the rest. Squared error for each group under partial pooling, with each group's own mean beside it. Seven of the eight are estimated better by pooling. The eighth, which was never from the population, is estimated 6.1 times worse — 13.9 against 2.3.

When borrowing goes wrong

Partial pooling wins on the total and can lose badly on one group. Placed six population widths out, the group that was never from the population is estimated six times worse than by its own mean — and nothing in the output says so.

hierarchical · Pooling What each estimator costs, against how many groups there are. Each point is 4,000 datasets, with the population spread estimated from the data rather than supplied. Partial pooling first beats BOTH of the estimators it sits between at 5 groups; below that, complete pooling — which estimates nothing at all — is the better answer. Its own cost falls from 1.751 at 2 groups to 0.795 at 40.

The fewest groups that can borrow

At three groups the estimator that shrinks towards its own data's mean returns the group means untouched, on every dataset, because its constant is J − 3. At two it expands instead of shrinking. And the number of groups at which partial pooling starts to be worth doing is five, or two, or never — it depends on how far apart the groups are.

hierarchical · Pooling What 240 observations are worth, by which question is asked. 8 rows and 10 columns with 3 observations in each cell — 240 in all, each belonging to one row and one column, neither nested in the other. the overall mean: variance 0.1703 against a naive 0.0060, a design effect of 28.4 and 8.5 effective observations; a difference between two rows: variance 2.0682 against a naive 0.0960, a design effect of 21.5 and 11.1 effective observations; a difference between two columns: variance 1.0845 against a naive 0.1200, a design effect of 9.0 and 26.6 effective observations.

Two groupings that cross

Pupils belong to a school and to a neighbourhood, and neither is nested in the other. There is then no design effect: the overall mean is worth 8.5 independent observations out of 240, a row difference 11.1 and a column difference 26.6, and which grouping matters depends on the question rather than on the study.

multilevel · Levels What each group gains from being pooled, τ = 1. Eight groups whose sizes span a factor of 13.3. The smallest gains 2.076 of squared error, which is 36.8% of the total reduction; the largest gains 0.030, which is 0.5%. 2 of the eight account for half of everything pooling buys.

Where the borrowing goes

Pooling cuts the total squared error across eight groups by 56%. Two of the eight take 61% of that reduction, the four best-measured groups share 11% between them, and the largest group gets 1.5% of what the smallest does. The headline is a fact about the groups nobody was asking about.

hierarchical · Pooling What a variance estimated from K units is worth. The between-unit mean square is a scaled chi-square on K − 1 degrees of freedom, so the estimator's whole distribution is decided by the number of units. At two units its interquartile range spans a factor of 13.03 and its ten-to-ninety range a factor of 171.3, and it comes out exactly zero on 26.7% of studies. The closed form and 3,000 simulated studies agree to 0.051 at every quantile.

A level with two units

A variance estimated from two units is a scaled chi-square on one degree of freedom. Its interquartile range spans a factor of thirteen, its ten-to-ninety range a factor of a hundred and seventy-one, and it comes out exactly zero on 26.7% of studies — so the design effect it decides runs from 1.00 to 7.01 against a truth of 4.69.

multilevel · Levels Twelve groups from two clusters, τ = 1. Every group's truth is in one of two clusters, and the population's total spread is exactly τ = 1, so the analysis recovers τ̂ = 1.515 and every shrinkage weight is what it would be for a single normal population. The estimates are pulled towards the grand mean, which is the middle of the gap — a place 0 of the 12 truths are and 6 of the estimates end up.

One population, or two

Group effects from two clusters rather than one bell, with the same total spread. The analysis recovers the same population spread, uses the same weight for every group, and reports nothing unusual — while 46% of its estimates land in a region holding 6.6% of the truths.

hierarchical · Pooling Each interval covers one question and not the other. Coverage of each interval for the overall mean, scored against both estimands, over 20,000 two-site studies of 10 observations apiece. The fixed-effect interval covers the mean of the two sites in hand 96.37% of the time and the population mean 54.77%. The random-effects interval covers the population mean 94.96% — exactly its level, from one degree of freedom — and over-covers the two sites in hand at 98.25%. Both are correct; they are answers to different questions printed in the same place.

What a two-unit study should report

The fixed-effect interval covers the mean of the two sites in hand 96.37% of the time and the population mean 54.77%. The random-effects interval covers the population mean 94.96% — exactly its level, from one degree of freedom — and is 11.6 times wider.

multilevel · Levels

Named alongside it

The objects these essays reach for when they reach for this one.

Partial poolingShrinkageEmpirical BayesVariance componentsRandom-effectsSample sizeStudy designMethod of momentsPosteriorPriorCoverageEffective sample size

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